Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Vma21Q78T54 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Snora78-201ENSMUST00000158630 128 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Gm6114-201ENSMUST00000182472 968 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Gm43118-201ENSMUST00000199149 775 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.6□□□□□ -0.87
Vma21Q78T54 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.6□□□□□ -0.87
Vma21Q78T54 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Vma21Q78T54 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.59□□□□□ -0.87
Vma21Q78T54 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.59□□□□□ -0.87
Vma21Q78T54 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm5419-201ENSMUST00000119301 527 ntBASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm14441-201ENSMUST00000121960 540 ntBASIC9.59□□□□□ -0.87
Vma21Q78T54 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm19994-201ENSMUST00000217086 586 ntBASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.59□□□□□ -0.87
Vma21Q78T54 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.59□□□□□ -0.87
Vma21Q78T54 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.59□□□□□ -0.87
Vma21Q78T54 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Vma21Q78T54 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Vma21Q78T54 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.88
Vma21Q78T54 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Vma21Q78T54 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Vma21Q78T54 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.58□□□□□ -0.88
Vma21Q78T54 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Vma21Q78T54 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.58□□□□□ -0.88
Vma21Q78T54 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Vma21Q78T54 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.58□□□□□ -0.88
Vma21Q78T54 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.58□□□□□ -0.88
Vma21Q78T54 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Vma21Q78T54 Gm22018-201ENSMUST00000104357 131 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms