Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm38151-201ENSMUST00000195085 289 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm44506-201ENSMUST00000206278 965 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm45398-201ENSMUST00000210561 165 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Ubfd1Q78JW9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ubfd1Q78JW9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ubfd1Q78JW9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Ubfd1Q78JW9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ubfd1Q78JW9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Ubfd1Q78JW9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ubfd1Q78JW9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ubfd1Q78JW9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm23045-201ENSMUST00000175041 96 ntBASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm5051-201ENSMUST00000204085 485 ntBASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm45113-201ENSMUST00000207518 165 ntBASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ubfd1Q78JW9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ubfd1Q78JW9 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms