Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Gm15549-201ENSMUST00000121595 622 ntBASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.42□□□□□ -0.26
Ddx55Q6ZPL9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Mir671-201ENSMUST00000102432 98 ntBASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm8451-201ENSMUST00000170338 447 ntBASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm5996-201ENSMUST00000211110 718 ntBASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm7536-201ENSMUST00000077389 444 ntBASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm5453-201ENSMUST00000080866 447 ntBASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx55Q6ZPL9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Gm7719-201ENSMUST00000182374 975 ntBASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx55Q6ZPL9 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms