Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Scaf4Q6PFF0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
Scaf4Q6PFF0 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Scaf4Q6PFF0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Rgr-203ENSMUST00000225070 4704 ntBASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Scaf4Q6PFF0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms