Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Gm12314-201ENSMUST00000118104 538 ntBASIC12.58□□□□□ -0.4
CtifQ6PEE2 Gm13829-201ENSMUST00000119600 138 ntBASIC12.58□□□□□ -0.4
CtifQ6PEE2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Gm5354-201ENSMUST00000182417 973 ntBASIC12.58□□□□□ -0.4
CtifQ6PEE2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.58□□□□□ -0.4
CtifQ6PEE2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.58□□□□□ -0.4
CtifQ6PEE2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CtifQ6PEE2 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CtifQ6PEE2 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.57□□□□□ -0.4
CtifQ6PEE2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.57□□□□□ -0.4
CtifQ6PEE2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.57□□□□□ -0.4
CtifQ6PEE2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CtifQ6PEE2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CtifQ6PEE2 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CtifQ6PEE2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.56□□□□□ -0.4
CtifQ6PEE2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.56□□□□□ -0.4
CtifQ6PEE2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.56□□□□□ -0.4
CtifQ6PEE2 Gm12341-201ENSMUST00000119724 503 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms