Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.41□□□□□ -0.58
Sdc3Q64519 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.41□□□□□ -0.58
Sdc3Q64519 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Gm23699-201ENSMUST00000158835 135 ntBASIC11.41□□□□□ -0.58
Sdc3Q64519 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.41□□□□□ -0.58
Sdc3Q64519 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.41□□□□□ -0.58
Sdc3Q64519 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.41□□□□□ -0.58
Sdc3Q64519 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sdc3Q64519 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.41□□□□□ -0.58
Sdc3Q64519 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sdc3Q64519 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.4□□□□□ -0.58
Sdc3Q64519 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sdc3Q64519 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sdc3Q64519 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.4□□□□□ -0.58
Sdc3Q64519 Gm11331-201ENSMUST00000119764 288 ntBASIC11.4□□□□□ -0.58
Sdc3Q64519 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Sdc3Q64519 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.4□□□□□ -0.58
Sdc3Q64519 Gm28686-201ENSMUST00000187404 609 ntBASIC11.4□□□□□ -0.58
Sdc3Q64519 AU022133-201ENSMUST00000200601 873 ntBASIC11.4□□□□□ -0.58
Sdc3Q64519 Gm9555-201ENSMUST00000200908 583 ntBASIC11.4□□□□□ -0.58
Sdc3Q64519 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.4□□□□□ -0.58
Sdc3Q64519 Nsd1-205ENSMUST00000224693 852 ntBASIC11.4□□□□□ -0.58
Sdc3Q64519 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.4□□□□□ -0.58
Sdc3Q64519 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sdc3Q64519 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.4□□□□□ -0.58
Sdc3Q64519 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.4□□□□□ -0.58
Sdc3Q64519 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sdc3Q64519 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.4□□□□□ -0.58
Sdc3Q64519 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sdc3Q64519 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sdc3Q64519 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sdc3Q64519 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sdc3Q64519 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sdc3Q64519 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.4□□□□□ -0.59
Sdc3Q64519 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sdc3Q64519 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Sdc3Q64519 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sdc3Q64519 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sdc3Q64519 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.39□□□□□ -0.59
Sdc3Q64519 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms