Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.04□□□□□ -0.32
Ecm1Q61508 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ecm1Q61508 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.04□□□□□ -0.32
Ecm1Q61508 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ecm1Q61508 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ecm1Q61508 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Ecm1Q61508 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ecm1Q61508 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.04□□□□□ -0.32
Ecm1Q61508 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ecm1Q61508 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ecm1Q61508 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ecm1Q61508 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ecm1Q61508 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ecm1Q61508 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm13549-201ENSMUST00000118339 796 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm16219-201ENSMUST00000120096 274 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm15329-201ENSMUST00000121408 155 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm11960-201ENSMUST00000122068 925 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.03□□□□□ -0.32
Ecm1Q61508 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.03□□□□□ -0.32
Ecm1Q61508 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.03□□□□□ -0.32
Ecm1Q61508 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ecm1Q61508 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.03□□□□□ -0.32
Ecm1Q61508 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ecm1Q61508 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ecm1Q61508 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ecm1Q61508 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ecm1Q61508 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ecm1Q61508 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.02□□□□□ -0.32
Ecm1Q61508 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ecm1Q61508 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ecm1Q61508 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ecm1Q61508 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.02□□□□□ -0.33
Ecm1Q61508 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ecm1Q61508 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ecm1Q61508 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.02□□□□□ -0.33
Ecm1Q61508 Gm8723-201ENSMUST00000166076 820 ntBASIC13.02□□□□□ -0.33
Ecm1Q61508 Gm8701-201ENSMUST00000169259 874 ntBASIC13.02□□□□□ -0.33
Ecm1Q61508 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.02□□□□□ -0.33
Ecm1Q61508 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ecm1Q61508 Gm8197-202ENSMUST00000193422 934 ntBASIC13.02□□□□□ -0.33
Ecm1Q61508 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Gm18968-201ENSMUST00000221319 862 ntBASIC13.02□□□□□ -0.33
Ecm1Q61508 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ecm1Q61508 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.02□□□□□ -0.33
Ecm1Q61508 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ecm1Q61508 Cog3-203ENSMUST00000227473 4197 ntBASIC13.02□□□□□ -0.33
Ecm1Q61508 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ecm1Q61508 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ecm1Q61508 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ecm1Q61508 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ecm1Q61508 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms