Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.04□□□□□ -0.32
Ift88Q61371 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.04□□□□□ -0.32
Ift88Q61371 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.04□□□□□ -0.32
Ift88Q61371 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.04□□□□□ -0.32
Ift88Q61371 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.04□□□□□ -0.32
Ift88Q61371 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ift88Q61371 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.04□□□□□ -0.32
Ift88Q61371 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ift88Q61371 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.03□□□□□ -0.32
Ift88Q61371 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ift88Q61371 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ift88Q61371 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.03□□□□□ -0.32
Ift88Q61371 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ift88Q61371 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.03□□□□□ -0.32
Ift88Q61371 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.03□□□□□ -0.32
Ift88Q61371 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.03□□□□□ -0.32
Ift88Q61371 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ift88Q61371 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.03□□□□□ -0.32
Ift88Q61371 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.03□□□□□ -0.32
Ift88Q61371 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ift88Q61371 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.03□□□□□ -0.32
Ift88Q61371 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.02□□□□□ -0.32
Ift88Q61371 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.02□□□□□ -0.32
Ift88Q61371 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.02□□□□□ -0.32
Ift88Q61371 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ift88Q61371 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.02□□□□□ -0.32
Ift88Q61371 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ift88Q61371 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ift88Q61371 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.02□□□□□ -0.33
Ift88Q61371 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.02□□□□□ -0.33
Ift88Q61371 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Ift88Q61371 Gm12015-201ENSMUST00000117065 843 ntBASIC13.02□□□□□ -0.33
Ift88Q61371 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.02□□□□□ -0.33
Ift88Q61371 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Gm29396-201ENSMUST00000185659 716 ntBASIC13.02□□□□□ -0.33
Ift88Q61371 Gm19287-201ENSMUST00000203190 358 ntBASIC13.02□□□□□ -0.33
Ift88Q61371 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.02□□□□□ -0.33
Ift88Q61371 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.02□□□□□ -0.33
Ift88Q61371 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ift88Q61371 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ift88Q61371 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.02□□□□□ -0.33
Ift88Q61371 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ift88Q61371 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ift88Q61371 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms