Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm14999-201ENSMUST00000121039 624 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm42937-201ENSMUST00000197360 752 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm2423-201ENSMUST00000074863 733 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm10268-201ENSMUST00000085340 555 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm4984-201ENSMUST00000115987 360 ntBASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm13570-201ENSMUST00000140763 309 ntBASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm6114-201ENSMUST00000182472 968 ntBASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm27892-201ENSMUST00000185017 106 ntBASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.17□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms