Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf20Q5DTM8 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm14130-201ENSMUST00000118417 987 ntBASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm8343-201ENSMUST00000182705 994 ntBASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm36991-201ENSMUST00000191800 648 ntBASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm43184-201ENSMUST00000197247 542 ntBASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm8913-201ENSMUST00000209491 641 ntBASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf20Q5DTM8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Gm38187-201ENSMUST00000195609 4709 ntBASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf20Q5DTM8 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf20Q5DTM8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms