Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.67□□□□□ -0.54
Scn2bQ56A07 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.67□□□□□ -0.54
Scn2bQ56A07 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Gm8712-201ENSMUST00000221090 701 ntBASIC11.67□□□□□ -0.54
Scn2bQ56A07 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.67□□□□□ -0.54
Scn2bQ56A07 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.67□□□□□ -0.54
Scn2bQ56A07 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Scn2bQ56A07 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.66□□□□□ -0.54
Scn2bQ56A07 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.66□□□□□ -0.54
Scn2bQ56A07 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Gm14644-201ENSMUST00000116671 647 ntBASIC11.66□□□□□ -0.54
Scn2bQ56A07 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Gm26083-201ENSMUST00000157904 193 ntBASIC11.66□□□□□ -0.54
Scn2bQ56A07 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Gm38314-201ENSMUST00000195709 625 ntBASIC11.66□□□□□ -0.54
Scn2bQ56A07 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Gm6082-201ENSMUST00000215204 454 ntBASIC11.66□□□□□ -0.54
Scn2bQ56A07 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.66□□□□□ -0.54
Scn2bQ56A07 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Scn2bQ56A07 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.65□□□□□ -0.54
Scn2bQ56A07 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.65□□□□□ -0.54
Scn2bQ56A07 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.65□□□□□ -0.54
Scn2bQ56A07 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Scn2bQ56A07 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.65□□□□□ -0.54
Scn2bQ56A07 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms