Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm13035-201ENSMUST00000117496 342 ntBASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm4909-201ENSMUST00000118749 794 ntBASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Rps4l-202ENSMUST00000204242 789 ntBASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Lect2-202ENSMUST00000225183 823 ntBASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm10288-201ENSMUST00000084614 537 ntBASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.84□□□□□ -0.67
Nhlrc4Q3UP44 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nhlrc4Q3UP44 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Nhlrc4Q3UP44 Paupar-201ENSMUST00000194826 3482 ntBASIC10.83□□□□□ -0.67
Nhlrc4Q3UP44 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gm14058-201ENSMUST00000116082 735 ntBASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gm7851-201ENSMUST00000117574 323 ntBASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gm13461-201ENSMUST00000120980 662 ntBASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gm8815-201ENSMUST00000173809 620 ntBASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Gm7848-201ENSMUST00000210739 718 ntBASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nhlrc4Q3UP44 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms