Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43aQ3TL54 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Gm10434-201ENSMUST00000101158 471 ntBASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Gm13786-201ENSMUST00000122371 333 ntBASIC12.53□□□□□ -0.4
Trim43aQ3TL54 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Gm29396-201ENSMUST00000185659 716 ntBASIC12.53□□□□□ -0.4
Trim43aQ3TL54 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Gm9996-201ENSMUST00000070359 913 ntBASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43aQ3TL54 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43aQ3TL54 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43aQ3TL54 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43aQ3TL54 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43aQ3TL54 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43aQ3TL54 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43aQ3TL54 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43aQ3TL54 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43aQ3TL54 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim43aQ3TL54 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm6023-201ENSMUST00000118217 606 ntBASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm12241-201ENSMUST00000118330 726 ntBASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm5419-201ENSMUST00000119301 527 ntBASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm12164-201ENSMUST00000121695 551 ntBASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm6114-201ENSMUST00000182472 968 ntBASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm44364-201ENSMUST00000198368 141 ntBASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm9368-201ENSMUST00000219348 831 ntBASIC12.52□□□□□ -0.41
Trim43aQ3TL54 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim43aQ3TL54 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim43aQ3TL54 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms