Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC9.68□□□□□ -0.86
Trim63Q38HM4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.67□□□□□ -0.86
Trim63Q38HM4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.67□□□□□ -0.86
Trim63Q38HM4 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9.67□□□□□ -0.86
Trim63Q38HM4 Gm11452-201ENSMUST00000122376 690 ntBASIC9.67□□□□□ -0.86
Trim63Q38HM4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC9.67□□□□□ -0.86
Trim63Q38HM4 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC9.67□□□□□ -0.86
Trim63Q38HM4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.67□□□□□ -0.86
Trim63Q38HM4 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.67□□□□□ -0.86
Trim63Q38HM4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim63Q38HM4 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.66□□□□□ -0.86
Trim63Q38HM4 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm45394-201ENSMUST00000209240 1175 ntBASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trim63Q38HM4 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms