Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm12164-201ENSMUST00000121695 551 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm5259-201ENSMUST00000191231 800 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm45113-201ENSMUST00000207518 165 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm24312-201ENSMUST00000178677 119 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm8828-201ENSMUST00000196786 1290 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm44540-201ENSMUST00000205640 354 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd8Q09XV5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.54□□□□□ -0.72
Chd8Q09XV5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.53□□□□□ -0.72
Chd8Q09XV5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.53□□□□□ -0.72
Chd8Q09XV5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.53□□□□□ -0.72
Chd8Q09XV5 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Gm14148-201ENSMUST00000122433 1008 ntBASIC10.53□□□□□ -0.72
Chd8Q09XV5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Gm21631-201ENSMUST00000195041 754 ntBASIC10.53□□□□□ -0.72
Chd8Q09XV5 AC124772.3-201ENSMUST00000222535 575 ntBASIC10.53□□□□□ -0.72
Chd8Q09XV5 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 AC163638.2-201ENSMUST00000224920 827 ntBASIC10.53□□□□□ -0.72
Chd8Q09XV5 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.53□□□□□ -0.72
Chd8Q09XV5 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd8Q09XV5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Chd8Q09XV5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd8Q09XV5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chd8Q09XV5 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.52□□□□□ -0.72
Chd8Q09XV5 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.52□□□□□ -0.72
Chd8Q09XV5 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chd8Q09XV5 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms