Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm37905-201ENSMUST00000195310 341 ntBASIC12.02□□□□□ -0.49
Ebf1Q07802 Gm8956-201ENSMUST00000203939 825 ntBASIC12.02□□□□□ -0.49
Ebf1Q07802 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.02□□□□□ -0.49
Ebf1Q07802 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.02□□□□□ -0.49
Ebf1Q07802 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.02□□□□□ -0.49
Ebf1Q07802 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Gm5705-201ENSMUST00000066241 711 ntBASIC12.02□□□□□ -0.49
Ebf1Q07802 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ebf1Q07802 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ebf1Q07802 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.02□□□□□ -0.49
Ebf1Q07802 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ebf1Q07802 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ebf1Q07802 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf1Q07802 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ebf1Q07802 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm11956-201ENSMUST00000119525 512 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm12516-201ENSMUST00000120819 385 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm15595-201ENSMUST00000120840 961 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.01□□□□□ -0.49
Ebf1Q07802 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Ebf1Q07802 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm28324-201ENSMUST00000187913 264 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm34023-201ENSMUST00000195539 217 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm2517-201ENSMUST00000215651 348 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ebf1Q07802 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.01□□□□□ -0.49
Ebf1Q07802 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Ebf1Q07802 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.01□□□□□ -0.49
Ebf1Q07802 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.01□□□□□ -0.49
Ebf1Q07802 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf1Q07802 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ebf1Q07802 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Gm23912-201ENSMUST00000104687 87 ntBASIC12□□□□□ -0.49
Ebf1Q07802 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ebf1Q07802 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ebf1Q07802 Gm11451-201ENSMUST00000118946 630 ntBASIC12□□□□□ -0.49
Ebf1Q07802 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12□□□□□ -0.49
Ebf1Q07802 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12□□□□□ -0.49
Ebf1Q07802 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12□□□□□ -0.49
Ebf1Q07802 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Ebf1Q07802 Gm23771-201ENSMUST00000178702 110 ntBASIC12□□□□□ -0.49
Ebf1Q07802 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12□□□□□ -0.49
Ebf1Q07802 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12□□□□□ -0.49
Ebf1Q07802 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12□□□□□ -0.49
Ebf1Q07802 Gm44124-201ENSMUST00000204159 472 ntBASIC12□□□□□ -0.49
Ebf1Q07802 Gm9797-202ENSMUST00000218003 294 ntBASIC12□□□□□ -0.49
Ebf1Q07802 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12□□□□□ -0.49
Ebf1Q07802 Prrxl1-205ENSMUST00000228878 723 ntBASIC12□□□□□ -0.49
Ebf1Q07802 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf1Q07802 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms