Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm4978-201ENSMUST00000071565 801 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Mir341-201ENSMUST00000093593 96 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.97□□□□□ -0.49
Col9a1Q05722 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Col9a1Q05722 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col9a1Q05722 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Col9a1Q05722 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.96□□□□□ -0.49
Col9a1Q05722 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm15004-201ENSMUST00000119192 630 ntBASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm15136-201ENSMUST00000120552 533 ntBASIC11.96□□□□□ -0.49
Col9a1Q05722 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm22763-201ENSMUST00000158374 107 ntBASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Col9a1Q05722 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm26915-201ENSMUST00000183080 748 ntBASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm18776-201ENSMUST00000188833 654 ntBASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm45379-201ENSMUST00000211772 549 ntBASIC11.96□□□□□ -0.49
Col9a1Q05722 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC11.96□□□□□ -0.49
Col9a1Q05722 AC164597.1-201ENSMUST00000226538 514 ntBASIC11.96□□□□□ -0.49
Col9a1Q05722 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Col9a1Q05722 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Col9a1Q05722 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col9a1Q05722 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a1Q05722 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Col9a1Q05722 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.96□□□□□ -0.5
Col9a1Q05722 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a1Q05722 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a1Q05722 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.96□□□□□ -0.5
Col9a1Q05722 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a1Q05722 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a1Q05722 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Col9a1Q05722 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Col9a1Q05722 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Col9a1Q05722 AC156790.4-202ENSMUST00000228838 1418 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm13506-201ENSMUST00000120391 1083 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm25102-201ENSMUST00000122479 112 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm26238-201ENSMUST00000175538 117 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm9081-201ENSMUST00000182346 991 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm9022-201ENSMUST00000182482 992 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms