Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm24231-201ENSMUST00000104315 133 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm6754-201ENSMUST00000117124 913 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm28196-201ENSMUST00000187719 640 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm5870-201ENSMUST00000196461 282 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm5340-201ENSMUST00000203733 880 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm32390-201ENSMUST00000212713 1172 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.13□□□□□ -0.79
Col8a1Q00780 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Col8a1Q00780 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col8a1Q00780 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.12□□□□□ -0.79
Col8a1Q00780 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Gm11511-201ENSMUST00000118146 540 ntBASIC10.12□□□□□ -0.79
Col8a1Q00780 Gm12036-201ENSMUST00000120008 530 ntBASIC10.12□□□□□ -0.79
Col8a1Q00780 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.12□□□□□ -0.79
Col8a1Q00780 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.12□□□□□ -0.79
Col8a1Q00780 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.12□□□□□ -0.79
Col8a1Q00780 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col8a1Q00780 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms