Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GabpaQ00422 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GabpaQ00422 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GabpaQ00422 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GabpaQ00422 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GabpaQ00422 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.4□□□□□ -0.26
GabpaQ00422 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.4□□□□□ -0.26
GabpaQ00422 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GabpaQ00422 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
GabpaQ00422 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
GabpaQ00422 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.39□□□□□ -0.27
GabpaQ00422 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
GabpaQ00422 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GabpaQ00422 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GabpaQ00422 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.39□□□□□ -0.27
GabpaQ00422 Gm37905-201ENSMUST00000195310 341 ntBASIC13.39□□□□□ -0.27
GabpaQ00422 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.39□□□□□ -0.27
GabpaQ00422 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.39□□□□□ -0.27
GabpaQ00422 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
GabpaQ00422 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
GabpaQ00422 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.39□□□□□ -0.27
GabpaQ00422 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.39□□□□□ -0.27
GabpaQ00422 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GabpaQ00422 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GabpaQ00422 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.39□□□□□ -0.27
GabpaQ00422 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.39□□□□□ -0.27
GabpaQ00422 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.39□□□□□ -0.27
GabpaQ00422 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GabpaQ00422 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.38□□□□□ -0.27
GabpaQ00422 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Gm12516-201ENSMUST00000120819 385 ntBASIC13.38□□□□□ -0.27
GabpaQ00422 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.38□□□□□ -0.27
GabpaQ00422 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Gm23153-201ENSMUST00000175323 313 ntBASIC13.38□□□□□ -0.27
GabpaQ00422 Gm8574-201ENSMUST00000203207 924 ntBASIC13.38□□□□□ -0.27
GabpaQ00422 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.38□□□□□ -0.27
GabpaQ00422 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.38□□□□□ -0.27
GabpaQ00422 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.38□□□□□ -0.27
GabpaQ00422 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GabpaQ00422 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.38□□□□□ -0.27
GabpaQ00422 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GabpaQ00422 Gm5451-201ENSMUST00000080545 579 ntBASIC13.38□□□□□ -0.27
GabpaQ00422 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GabpaQ00422 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.38□□□□□ -0.27
GabpaQ00422 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GabpaQ00422 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GabpaQ00422 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GabpaQ00422 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.37□□□□□ -0.27
GabpaQ00422 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms