Protein–RNA interactions for Protein: Q00288

Pax8, Paired box protein Pax-8, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax8Q00288 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Pax8Q00288 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pax8Q00288 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pax8Q00288 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pax8Q00288 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pax8Q00288 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.05□□□□□ -0.8
Pax8Q00288 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pax8Q00288 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pax8Q00288 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pax8Q00288 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pax8Q00288 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Pax8Q00288 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Pax8Q00288 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Pax8Q00288 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.04□□□□□ -0.8
Pax8Q00288 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.04□□□□□ -0.8
Pax8Q00288 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Gm20426-201ENSMUST00000173657 440 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Gm28937-201ENSMUST00000185413 695 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Gm29400-201ENSMUST00000187208 695 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Gm28662-201ENSMUST00000188446 695 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Gm28251-201ENSMUST00000188835 695 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Gm37318-201ENSMUST00000194325 695 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Gm38017-201ENSMUST00000194768 695 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Gm37287-201ENSMUST00000195449 695 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Gm37793-201ENSMUST00000195548 695 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Gm5714-201ENSMUST00000197343 566 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.04□□□□□ -0.8
Pax8Q00288 Gm18753-201ENSMUST00000201000 566 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Pax8Q00288 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.04□□□□□ -0.8
Pax8Q00288 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pax8Q00288 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pax8Q00288 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.03□□□□□ -0.8
Pax8Q00288 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 Gm24891-201ENSMUST00000104391 136 ntBASIC10.03□□□□□ -0.8
Pax8Q00288 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 Gm12579-201ENSMUST00000118040 783 ntBASIC10.03□□□□□ -0.8
Pax8Q00288 Gm13045-201ENSMUST00000119019 712 ntBASIC10.03□□□□□ -0.8
Pax8Q00288 Gm15595-201ENSMUST00000120840 961 ntBASIC10.03□□□□□ -0.8
Pax8Q00288 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 Gm8815-201ENSMUST00000173809 620 ntBASIC10.03□□□□□ -0.8
Pax8Q00288 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 Gm19353-201ENSMUST00000184561 445 ntBASIC10.03□□□□□ -0.8
Pax8Q00288 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.03□□□□□ -0.8
Pax8Q00288 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Pax8Q00288 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.03□□□□□ -0.8
Pax8Q00288 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Pax8Q00288 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pax8Q00288 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms