Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm5369-201ENSMUST00000217499 588 ntBASIC11.22□□□□□ -0.61
Nkx3-2P97503 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.22□□□□□ -0.61
Nkx3-2P97503 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
Nkx3-2P97503 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.21□□□□□ -0.61
Nkx3-2P97503 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkx3-2P97503 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Gm14263-201ENSMUST00000117955 746 ntBASIC11.21□□□□□ -0.61
Nkx3-2P97503 Gm7722-201ENSMUST00000120646 741 ntBASIC11.21□□□□□ -0.61
Nkx3-2P97503 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Gm8959-201ENSMUST00000213150 571 ntBASIC11.21□□□□□ -0.61
Nkx3-2P97503 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.21□□□□□ -0.61
Nkx3-2P97503 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx3-2P97503 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.21□□□□□ -0.62
Nkx3-2P97503 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm14058-201ENSMUST00000116082 735 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm7851-201ENSMUST00000117574 323 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm12857-201ENSMUST00000117678 592 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm8566-201ENSMUST00000120174 465 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm12164-201ENSMUST00000121695 551 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm8100-201ENSMUST00000182906 988 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx3-2P97503 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms