Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-3P97334 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-3P97334 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nkx2-3P97334 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx2-3P97334 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Gm13422-201ENSMUST00000118834 504 ntBASIC14.78□□□□□ -0.04
Nkx2-3P97334 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.78□□□□□ -0.04
Nkx2-3P97334 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.78□□□□□ -0.04
Nkx2-3P97334 Gm35713-201ENSMUST00000210516 199 ntBASIC14.78□□□□□ -0.04
Nkx2-3P97334 Gm5805-201ENSMUST00000072779 456 ntBASIC14.78□□□□□ -0.04
Nkx2-3P97334 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Paupar-201ENSMUST00000194826 3482 ntBASIC14.78□□□□□ -0.04
Nkx2-3P97334 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx2-3P97334 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-3P97334 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Gm13549-201ENSMUST00000118339 796 ntBASIC14.77□□□□□ -0.05
Nkx2-3P97334 Gm12179-201ENSMUST00000118344 1272 ntBASIC14.77□□□□□ -0.05
Nkx2-3P97334 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC14.77□□□□□ -0.05
Nkx2-3P97334 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Gm22877-201ENSMUST00000175451 105 ntBASIC14.77□□□□□ -0.05
Nkx2-3P97334 Gm26989-201ENSMUST00000182608 749 ntBASIC14.77□□□□□ -0.05
Nkx2-3P97334 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.77□□□□□ -0.05
Nkx2-3P97334 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-3P97334 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.76□□□□□ -0.05
Nkx2-3P97334 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.76□□□□□ -0.05
Nkx2-3P97334 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.76□□□□□ -0.05
Nkx2-3P97334 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Gm13600-201ENSMUST00000117949 744 ntBASIC14.76□□□□□ -0.05
Nkx2-3P97334 Gm14219-201ENSMUST00000120414 288 ntBASIC14.76□□□□□ -0.05
Nkx2-3P97334 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Gm29067-201ENSMUST00000190821 470 ntBASIC14.76□□□□□ -0.05
Nkx2-3P97334 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Nkx2-3P97334 Gm8436-201ENSMUST00000210152 1080 ntBASIC14.76□□□□□ -0.05
Nkx2-3P97334 Gm5749-201ENSMUST00000210673 1090 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms