Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.91□□□□□ -0.82
SgcaP82350 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.91□□□□□ -0.82
SgcaP82350 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.91□□□□□ -0.82
SgcaP82350 Gm8463-201ENSMUST00000208573 613 ntBASIC9.91□□□□□ -0.82
SgcaP82350 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.91□□□□□ -0.82
SgcaP82350 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.91□□□□□ -0.82
SgcaP82350 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.91□□□□□ -0.82
SgcaP82350 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.91□□□□□ -0.82
SgcaP82350 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Gm2423-201ENSMUST00000074863 733 ntBASIC9.91□□□□□ -0.82
SgcaP82350 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC9.91□□□□□ -0.82
SgcaP82350 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.91□□□□□ -0.82
SgcaP82350 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.91□□□□□ -0.82
SgcaP82350 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.9□□□□□ -0.82
SgcaP82350 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.9□□□□□ -0.82
SgcaP82350 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SgcaP82350 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.9□□□□□ -0.82
SgcaP82350 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.9□□□□□ -0.82
SgcaP82350 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Gm12203-201ENSMUST00000118235 598 ntBASIC9.9□□□□□ -0.82
SgcaP82350 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SgcaP82350 Gm12209-201ENSMUST00000120089 596 ntBASIC9.9□□□□□ -0.82
SgcaP82350 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.9□□□□□ -0.82
SgcaP82350 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.9□□□□□ -0.82
SgcaP82350 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Gm23119-201ENSMUST00000158610 140 ntBASIC9.9□□□□□ -0.82
SgcaP82350 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.9□□□□□ -0.82
SgcaP82350 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Gm44958-201ENSMUST00000203734 736 ntBASIC9.9□□□□□ -0.82
SgcaP82350 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.9□□□□□ -0.82
SgcaP82350 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.9□□□□□ -0.82
SgcaP82350 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.9□□□□□ -0.82
SgcaP82350 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SgcaP82350 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SgcaP82350 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.9□□□□□ -0.82
SgcaP82350 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SgcaP82350 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SgcaP82350 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.9□□□□□ -0.83
SgcaP82350 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.9□□□□□ -0.83
SgcaP82350 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SgcaP82350 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SgcaP82350 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.9□□□□□ -0.83
SgcaP82350 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.89□□□□□ -0.83
SgcaP82350 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SgcaP82350 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
SgcaP82350 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms