Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Gm11793-201ENSMUST00000120433 981 ntBASIC11.01□□□□□ -0.65
SgcdP82347 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
SgcdP82347 Mir3547-201ENSMUST00000175461 88 ntBASIC11.01□□□□□ -0.65
SgcdP82347 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Gm29396-201ENSMUST00000185659 716 ntBASIC11.01□□□□□ -0.65
SgcdP82347 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.01□□□□□ -0.65
SgcdP82347 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.01□□□□□ -0.65
SgcdP82347 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SgcdP82347 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.01□□□□□ -0.65
SgcdP82347 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SgcdP82347 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.01□□□□□ -0.65
SgcdP82347 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.01□□□□□ -0.65
SgcdP82347 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SgcdP82347 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.01□□□□□ -0.65
SgcdP82347 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.01□□□□□ -0.65
SgcdP82347 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.01□□□□□ -0.65
SgcdP82347 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
SgcdP82347 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SgcdP82347 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11□□□□□ -0.65
SgcdP82347 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11□□□□□ -0.65
SgcdP82347 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Gm11618-201ENSMUST00000117946 267 ntBASIC11□□□□□ -0.65
SgcdP82347 Gm14381-201ENSMUST00000122105 414 ntBASIC11□□□□□ -0.65
SgcdP82347 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11□□□□□ -0.65
SgcdP82347 Gm22121-201ENSMUST00000175148 54 ntBASIC11□□□□□ -0.65
SgcdP82347 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Gm37922-201ENSMUST00000195596 455 ntBASIC11□□□□□ -0.65
SgcdP82347 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11□□□□□ -0.65
SgcdP82347 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Gm45865-201ENSMUST00000211815 945 ntBASIC11□□□□□ -0.65
SgcdP82347 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Gm2824-203ENSMUST00000226189 1228 ntBASIC11□□□□□ -0.65
SgcdP82347 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11□□□□□ -0.65
SgcdP82347 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Gm43963-201ENSMUST00000203466 2488 ntBASIC11□□□□□ -0.65
SgcdP82347 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SgcdP82347 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SgcdP82347 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SgcdP82347 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SgcdP82347 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.99□□□□□ -0.65
SgcdP82347 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SgcdP82347 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms