Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.19□□□□□ -0.14
Rad50P70388 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.19□□□□□ -0.14
Rad50P70388 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rad50P70388 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rad50P70388 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rad50P70388 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rad50P70388 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rad50P70388 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.19□□□□□ -0.14
Rad50P70388 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rad50P70388 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rad50P70388 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rad50P70388 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Gm26286-201ENSMUST00000104166 134 ntBASIC14.18□□□□□ -0.14
Rad50P70388 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Rad50P70388 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.18□□□□□ -0.14
Rad50P70388 Gm19287-201ENSMUST00000203190 358 ntBASIC14.18□□□□□ -0.14
Rad50P70388 Gm29787-201ENSMUST00000222129 849 ntBASIC14.18□□□□□ -0.14
Rad50P70388 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rad50P70388 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rad50P70388 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.18□□□□□ -0.14
Rad50P70388 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.18□□□□□ -0.14
Rad50P70388 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rad50P70388 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.17□□□□□ -0.14
Rad50P70388 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Mir7677-201ENSMUST00000184226 67 ntBASIC14.17□□□□□ -0.14
Rad50P70388 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.17□□□□□ -0.14
Rad50P70388 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Rad50P70388 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.17□□□□□ -0.14
Rad50P70388 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.17□□□□□ -0.14
Rad50P70388 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.17□□□□□ -0.14
Rad50P70388 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rad50P70388 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.17□□□□□ -0.14
Rad50P70388 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rad50P70388 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rad50P70388 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.16□□□□□ -0.14
Rad50P70388 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.16□□□□□ -0.14
Rad50P70388 Gm11960-201ENSMUST00000122068 925 ntBASIC14.16□□□□□ -0.14
Rad50P70388 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.16□□□□□ -0.14
Rad50P70388 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rad50P70388 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.16□□□□□ -0.14
Rad50P70388 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rad50P70388 Gm9211-201ENSMUST00000182882 975 ntBASIC14.16□□□□□ -0.14
Rad50P70388 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.16□□□□□ -0.14
Rad50P70388 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.16□□□□□ -0.14
Rad50P70388 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.16□□□□□ -0.14
Rad50P70388 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Rad50P70388 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.16□□□□□ -0.14
Rad50P70388 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rad50P70388 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rad50P70388 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rad50P70388 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms