Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.07□□□□□ -0.64
Six5P70178 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Six5P70178 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.07□□□□□ -0.64
Six5P70178 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.07□□□□□ -0.64
Six5P70178 Gm45186-201ENSMUST00000206874 478 ntBASIC11.07□□□□□ -0.64
Six5P70178 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Six5P70178 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Six5P70178 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.07□□□□□ -0.64
Six5P70178 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.07□□□□□ -0.64
Six5P70178 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.07□□□□□ -0.64
Six5P70178 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Six5P70178 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Six5P70178 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.07□□□□□ -0.64
Six5P70178 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.07□□□□□ -0.64
Six5P70178 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Six5P70178 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Six5P70178 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.06□□□□□ -0.64
Six5P70178 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Six5P70178 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.06□□□□□ -0.64
Six5P70178 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.06□□□□□ -0.64
Six5P70178 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.06□□□□□ -0.64
Six5P70178 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Six5P70178 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Six5P70178 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Six5P70178 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.06□□□□□ -0.64
Six5P70178 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Gm12380-201ENSMUST00000119012 544 ntBASIC11.06□□□□□ -0.64
Six5P70178 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.06□□□□□ -0.64
Six5P70178 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Six5P70178 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.06□□□□□ -0.64
Six5P70178 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Six5P70178 Gm18730-201ENSMUST00000218038 343 ntBASIC11.06□□□□□ -0.64
Six5P70178 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.06□□□□□ -0.64
Six5P70178 Gm8385-201ENSMUST00000058999 643 ntBASIC11.06□□□□□ -0.64
Six5P70178 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Six5P70178 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Six5P70178 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Six5P70178 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.05□□□□□ -0.64
Six5P70178 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Six5P70178 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.05□□□□□ -0.64
Six5P70178 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Six5P70178 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Six5P70178 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms