Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm3P62311 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.71□□□□□ -0.69
Lsm3P62311 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm3P62311 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm3P62311 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm3P62311 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm3P62311 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lsm3P62311 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm3P62311 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lsm3P62311 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lsm3P62311 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.71□□□□□ -0.69
Lsm3P62311 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.71□□□□□ -0.69
Lsm3P62311 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Lsm3P62311 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lsm3P62311 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Lsm3P62311 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Lsm3P62311 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lsm3P62311 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lsm3P62311 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
Lsm3P62311 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
Lsm3P62311 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Lsm3P62311 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Lsm3P62311 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.7□□□□□ -0.7
Lsm3P62311 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Lsm3P62311 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Lsm3P62311 Gm14701-201ENSMUST00000117156 348 ntBASIC10.7□□□□□ -0.7
Lsm3P62311 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.7□□□□□ -0.7
Lsm3P62311 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
Lsm3P62311 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Lsm3P62311 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Lsm3P62311 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Lsm3P62311 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.7□□□□□ -0.7
Lsm3P62311 Gm42612-201ENSMUST00000197986 623 ntBASIC10.7□□□□□ -0.7
Lsm3P62311 Gm43170-201ENSMUST00000199827 612 ntBASIC10.7□□□□□ -0.7
Lsm3P62311 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.7□□□□□ -0.7
Lsm3P62311 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.7□□□□□ -0.7
Lsm3P62311 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Lsm3P62311 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.7□□□□□ -0.7
Lsm3P62311 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.7□□□□□ -0.7
Lsm3P62311 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Lsm3P62311 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Lsm3P62311 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Lsm3P62311 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm3P62311 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm3P62311 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Lsm3P62311 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.69□□□□□ -0.7
Lsm3P62311 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.69□□□□□ -0.7
Lsm3P62311 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.69□□□□□ -0.7
Lsm3P62311 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.69□□□□□ -0.7
Lsm3P62311 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.69□□□□□ -0.7
Lsm3P62311 Gm25927-201ENSMUST00000175058 117 ntBASIC10.69□□□□□ -0.7
Lsm3P62311 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms