Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.53□□□□□ -0.88
Lmo4P61969 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC9.53□□□□□ -0.88
Lmo4P61969 Gm11960-201ENSMUST00000122068 925 ntBASIC9.53□□□□□ -0.88
Lmo4P61969 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.53□□□□□ -0.88
Lmo4P61969 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.53□□□□□ -0.88
Lmo4P61969 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
Lmo4P61969 Gm7504-201ENSMUST00000201449 424 ntBASIC9.53□□□□□ -0.88
Lmo4P61969 Gm44158-201ENSMUST00000203881 505 ntBASIC9.53□□□□□ -0.88
Lmo4P61969 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 AC166341.2-201ENSMUST00000220571 120 ntBASIC9.53□□□□□ -0.88
Lmo4P61969 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.53□□□□□ -0.88
Lmo4P61969 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC9.53□□□□□ -0.88
Lmo4P61969 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
Lmo4P61969 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.53□□□□□ -0.88
Lmo4P61969 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Lmo4P61969 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.53□□□□□ -0.88
Lmo4P61969 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.53□□□□□ -0.88
Lmo4P61969 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Lmo4P61969 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lmo4P61969 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Lmo4P61969 Gm27194-201ENSMUST00000175753 2936 ntBASIC9.52□□□□□ -0.88
Lmo4P61969 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Lmo4P61969 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Lmo4P61969 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Lmo4P61969 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Lmo4P61969 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Lmo4P61969 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Lmo4P61969 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Lmo4P61969 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Lmo4P61969 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Lmo4P61969 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.52□□□□□ -0.89
Lmo4P61969 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.52□□□□□ -0.89
Lmo4P61969 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Lmo4P61969 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Gm13937-201ENSMUST00000121000 988 ntBASIC9.52□□□□□ -0.89
Lmo4P61969 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Gm22442-201ENSMUST00000157256 144 ntBASIC9.52□□□□□ -0.89
Lmo4P61969 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Gm7741-201ENSMUST00000181445 989 ntBASIC9.52□□□□□ -0.89
Lmo4P61969 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.52□□□□□ -0.89
Lmo4P61969 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.52□□□□□ -0.89
Lmo4P61969 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC9.52□□□□□ -0.89
Lmo4P61969 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.52□□□□□ -0.89
Lmo4P61969 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Lmo4P61969 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Lmo4P61969 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.52□□□□□ -0.89
Lmo4P61969 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Lmo4P61969 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms