Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.42□□□□□ -0.42
NcanP55066 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.42□□□□□ -0.42
NcanP55066 Gm5982-201ENSMUST00000196234 512 ntBASIC12.42□□□□□ -0.42
NcanP55066 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.42□□□□□ -0.42
NcanP55066 Gm18010-201ENSMUST00000203553 202 ntBASIC12.42□□□□□ -0.42
NcanP55066 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.42□□□□□ -0.42
NcanP55066 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.42□□□□□ -0.42
NcanP55066 Gm2594-201ENSMUST00000214774 742 ntBASIC12.42□□□□□ -0.42
NcanP55066 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.42□□□□□ -0.42
NcanP55066 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.42□□□□□ -0.42
NcanP55066 Matn2-206ENSMUST00000228570 2798 ntBASIC12.42□□□□□ -0.42
NcanP55066 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NcanP55066 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
NcanP55066 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NcanP55066 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NcanP55066 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
NcanP55066 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.41□□□□□ -0.42
NcanP55066 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.41□□□□□ -0.42
NcanP55066 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Gm23745-201ENSMUST00000104230 125 ntBASIC12.41□□□□□ -0.42
NcanP55066 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.41□□□□□ -0.42
NcanP55066 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.41□□□□□ -0.42
NcanP55066 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
NcanP55066 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.41□□□□□ -0.42
NcanP55066 Gm15197-201ENSMUST00000120526 478 ntBASIC12.41□□□□□ -0.42
NcanP55066 Gm14165-201ENSMUST00000121456 952 ntBASIC12.41□□□□□ -0.42
NcanP55066 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.41□□□□□ -0.42
NcanP55066 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.41□□□□□ -0.42
NcanP55066 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NcanP55066 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.41□□□□□ -0.42
NcanP55066 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.41□□□□□ -0.42
NcanP55066 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.41□□□□□ -0.42
NcanP55066 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NcanP55066 Capsl-202ENSMUST00000226688 739 ntBASIC12.41□□□□□ -0.42
NcanP55066 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.41□□□□□ -0.42
NcanP55066 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Gm5449-201ENSMUST00000081132 357 ntBASIC12.41□□□□□ -0.42
NcanP55066 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NcanP55066 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.41□□□□□ -0.42
NcanP55066 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NcanP55066 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.41□□□□□ -0.42
NcanP55066 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.41□□□□□ -0.42
NcanP55066 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
NcanP55066 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NcanP55066 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NcanP55066 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.4□□□□□ -0.42
NcanP55066 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.4□□□□□ -0.42
NcanP55066 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NcanP55066 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
NcanP55066 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NcanP55066 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.4□□□□□ -0.42
NcanP55066 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Gm8226-201ENSMUST00000190511 798 ntBASIC12.4□□□□□ -0.42
NcanP55066 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Gm7815-201ENSMUST00000196104 832 ntBASIC12.4□□□□□ -0.42
NcanP55066 Gm30055-201ENSMUST00000203175 803 ntBASIC12.4□□□□□ -0.42
NcanP55066 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.4□□□□□ -0.42
NcanP55066 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.4□□□□□ -0.42
NcanP55066 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NcanP55066 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.4□□□□□ -0.42
NcanP55066 AC165260.3-201ENSMUST00000225101 665 ntBASIC12.4□□□□□ -0.42
NcanP55066 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.4□□□□□ -0.42
NcanP55066 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.4□□□□□ -0.42
NcanP55066 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.4□□□□□ -0.42
NcanP55066 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms