Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Mir671-201ENSMUST00000102432 98 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.78□□□□□ -0.52
Atxn1P54254 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Gm12218-201ENSMUST00000117666 399 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Atxn1P54254 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.78□□□□□ -0.52
Atxn1P54254 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Atxn1P54254 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Atxn1P54254 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.78□□□□□ -0.52
Atxn1P54254 Gm8531-201ENSMUST00000188319 893 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Gm29410-201ENSMUST00000188383 694 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Gm45500-201ENSMUST00000211676 803 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Gm4604-201ENSMUST00000025040 390 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Atxn1P54254 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Atxn1P54254 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atxn1P54254 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.77□□□□□ -0.52
Atxn1P54254 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atxn1P54254 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atxn1P54254 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atxn1P54254 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atxn1P54254 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atxn1P54254 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atxn1P54254 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atxn1P54254 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Atxn1P54254 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.77□□□□□ -0.53
Atxn1P54254 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.77□□□□□ -0.53
Atxn1P54254 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Atxn1P54254 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.77□□□□□ -0.53
Atxn1P54254 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.77□□□□□ -0.53
Atxn1P54254 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.77□□□□□ -0.53
Atxn1P54254 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.77□□□□□ -0.53
Atxn1P54254 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.77□□□□□ -0.53
Atxn1P54254 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.77□□□□□ -0.53
Atxn1P54254 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Atxn1P54254 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atxn1P54254 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.77□□□□□ -0.53
Atxn1P54254 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.77□□□□□ -0.53
Atxn1P54254 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.76□□□□□ -0.53
Atxn1P54254 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm24934-201ENSMUST00000103764 111 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm11979-201ENSMUST00000119629 743 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 Gm15566-201ENSMUST00000121130 590 ntBASIC11.76□□□□□ -0.53
Atxn1P54254 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.76□□□□□ -0.53
Atxn1P54254 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Atxn1P54254 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms