Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cux1P53564 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.88■□□□□ 0.45
Cux1P53564 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Gm9244-201ENSMUST00000056767 2129 ntBASIC17.88■□□□□ 0.45
Cux1P53564 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Gm12943-201ENSMUST00000119616 210 ntBASIC17.88■□□□□ 0.45
Cux1P53564 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 Gm15620-201ENSMUST00000122949 270 ntBASIC17.88■□□□□ 0.45
Cux1P53564 Gm25830-201ENSMUST00000158923 132 ntBASIC17.88■□□□□ 0.45
Cux1P53564 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC17.88■□□□□ 0.45
Cux1P53564 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC17.88■□□□□ 0.45
Cux1P53564 Gm37365-201ENSMUST00000193109 409 ntBASIC17.88■□□□□ 0.45
Cux1P53564 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cux1P53564 Gm44008-201ENSMUST00000204345 412 ntBASIC17.88■□□□□ 0.45
Cux1P53564 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC17.88■□□□□ 0.45
Cux1P53564 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cux1P53564 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cux1P53564 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cux1P53564 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Cux1P53564 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cux1P53564 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cux1P53564 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC17.87■□□□□ 0.45
Cux1P53564 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC17.87■□□□□ 0.45
Cux1P53564 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC17.87■□□□□ 0.45
Cux1P53564 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC17.87■□□□□ 0.45
Cux1P53564 Capsl-202ENSMUST00000226688 739 ntBASIC17.87■□□□□ 0.45
Cux1P53564 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC17.87■□□□□ 0.45
Cux1P53564 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cux1P53564 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cux1P53564 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cux1P53564 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cux1P53564 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 AC154517.2-201ENSMUST00000220829 2458 ntBASIC17.86■□□□□ 0.45
Cux1P53564 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Cux1P53564 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC17.86■□□□□ 0.45
Cux1P53564 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Gm44573-201ENSMUST00000191753 2370 ntBASIC17.86■□□□□ 0.45
Cux1P53564 Gm25343-201ENSMUST00000157460 107 ntBASIC17.86■□□□□ 0.45
Cux1P53564 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Gm18801-201ENSMUST00000186616 536 ntBASIC17.86■□□□□ 0.45
Cux1P53564 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
Cux1P53564 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC17.86■□□□□ 0.45
Cux1P53564 Gm29763-201ENSMUST00000205306 616 ntBASIC17.86■□□□□ 0.45
Cux1P53564 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC17.86■□□□□ 0.45
Cux1P53564 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC17.86■□□□□ 0.45
Cux1P53564 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cux1P53564 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cux1P53564 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cux1P53564 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC17.85■□□□□ 0.45
Cux1P53564 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.85■□□□□ 0.45
Cux1P53564 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cux1P53564 Gm22846-201ENSMUST00000157706 270 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms