Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Gm5706-201ENSMUST00000181525 993 ntBASIC12.12□□□□□ -0.47
ClgnP52194 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
ClgnP52194 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.12□□□□□ -0.47
ClgnP52194 Gm38241-201ENSMUST00000192641 898 ntBASIC12.12□□□□□ -0.47
ClgnP52194 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Gm35960-201ENSMUST00000202712 767 ntBASIC12.12□□□□□ -0.47
ClgnP52194 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.12□□□□□ -0.47
ClgnP52194 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.12□□□□□ -0.47
ClgnP52194 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.12□□□□□ -0.47
ClgnP52194 Cts7-204ENSMUST00000225321 1257 ntBASIC12.12□□□□□ -0.47
ClgnP52194 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.12□□□□□ -0.47
ClgnP52194 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ClgnP52194 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ClgnP52194 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ClgnP52194 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
ClgnP52194 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClgnP52194 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
ClgnP52194 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ClgnP52194 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.11□□□□□ -0.47
ClgnP52194 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ClgnP52194 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.11□□□□□ -0.47
ClgnP52194 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.11□□□□□ -0.47
ClgnP52194 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.11□□□□□ -0.47
ClgnP52194 Gm14381-201ENSMUST00000122105 414 ntBASIC12.11□□□□□ -0.47
ClgnP52194 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.11□□□□□ -0.47
ClgnP52194 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.11□□□□□ -0.47
ClgnP52194 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.11□□□□□ -0.47
ClgnP52194 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.11□□□□□ -0.47
ClgnP52194 Gm45865-201ENSMUST00000211815 945 ntBASIC12.11□□□□□ -0.47
ClgnP52194 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Gm8712-201ENSMUST00000221090 701 ntBASIC12.11□□□□□ -0.47
ClgnP52194 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.11□□□□□ -0.47
ClgnP52194 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClgnP52194 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
ClgnP52194 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClgnP52194 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ClgnP52194 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ClgnP52194 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ClgnP52194 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
ClgnP52194 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.1□□□□□ -0.47
ClgnP52194 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.1□□□□□ -0.47
ClgnP52194 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ClgnP52194 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Gm20482-202ENSMUST00000174729 825 ntBASIC12.1□□□□□ -0.47
ClgnP52194 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ClgnP52194 Gm27046-201ENSMUST00000182160 463 ntBASIC12.1□□□□□ -0.47
ClgnP52194 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.1□□□□□ -0.47
ClgnP52194 Gm8885-201ENSMUST00000189382 598 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms