Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox2P48432 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.05□□□□□ -0.64
Sox2P48432 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox2P48432 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Sox2P48432 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Sox2P48432 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox2P48432 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.04□□□□□ -0.64
Sox2P48432 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sox2P48432 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox2P48432 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Sox2P48432 Gm11700-201ENSMUST00000119409 403 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Gm13316-201ENSMUST00000140537 691 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Gm16379-201ENSMUST00000161469 348 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.04□□□□□ -0.64
Sox2P48432 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Gm8762-201ENSMUST00000193486 339 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox2P48432 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox2P48432 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox2P48432 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Sox2P48432 BC043934-202ENSMUST00000185694 2356 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.04□□□□□ -0.64
Sox2P48432 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox2P48432 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox2P48432 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox2P48432 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
Sox2P48432 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sox2P48432 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Sox2P48432 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sox2P48432 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.03□□□□□ -0.64
Sox2P48432 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.03□□□□□ -0.64
Sox2P48432 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.03□□□□□ -0.64
Sox2P48432 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox2P48432 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.03□□□□□ -0.64
Sox2P48432 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.03□□□□□ -0.64
Sox2P48432 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox2P48432 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox2P48432 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms