Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Gm13461-201ENSMUST00000120980 662 ntBASIC11.57□□□□□ -0.56
Gli1P47806 Gm13570-201ENSMUST00000140763 309 ntBASIC11.57□□□□□ -0.56
Gli1P47806 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Gm27046-201ENSMUST00000182160 463 ntBASIC11.57□□□□□ -0.56
Gli1P47806 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Gli1P47806 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.57□□□□□ -0.56
Gli1P47806 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Gm22058-201ENSMUST00000083393 310 ntBASIC11.57□□□□□ -0.56
Gli1P47806 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Gli1P47806 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Gli1P47806 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Gli1P47806 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.57□□□□□ -0.56
Gli1P47806 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.57□□□□□ -0.56
Gli1P47806 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.57□□□□□ -0.56
Gli1P47806 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Gli1P47806 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.56□□□□□ -0.56
Gli1P47806 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.56□□□□□ -0.56
Gli1P47806 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Gli1P47806 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.56□□□□□ -0.56
Gli1P47806 Gm11930-201ENSMUST00000117788 190 ntBASIC11.56□□□□□ -0.56
Gli1P47806 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.56□□□□□ -0.56
Gli1P47806 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Gli1P47806 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Gm22334-201ENSMUST00000158070 133 ntBASIC11.56□□□□□ -0.56
Gli1P47806 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Gli1P47806 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Gli1P47806 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.56□□□□□ -0.56
Gli1P47806 Gm44405-201ENSMUST00000198952 126 ntBASIC11.56□□□□□ -0.56
Gli1P47806 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.56□□□□□ -0.56
Gli1P47806 Gm44958-201ENSMUST00000203734 736 ntBASIC11.56□□□□□ -0.56
Gli1P47806 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.56□□□□□ -0.56
Gli1P47806 Gm5950-201ENSMUST00000213337 772 ntBASIC11.56□□□□□ -0.56
Gli1P47806 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Gli1P47806 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Gli1P47806 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Gli1P47806 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gli1P47806 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.55□□□□□ -0.56
Gli1P47806 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.55□□□□□ -0.56
Gli1P47806 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Gli1P47806 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.55□□□□□ -0.56
Gli1P47806 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gli1P47806 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Gli1P47806 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.55□□□□□ -0.56
Gli1P47806 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Gli1P47806 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Gm15547-201ENSMUST00000122152 333 ntBASIC11.55□□□□□ -0.56
Gli1P47806 AA914427-201ENSMUST00000193194 1166 ntBASIC11.55□□□□□ -0.56
Gli1P47806 Gm43947-201ENSMUST00000203019 959 ntBASIC11.55□□□□□ -0.56
Gli1P47806 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.55□□□□□ -0.56
Gli1P47806 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.55□□□□□ -0.56
Gli1P47806 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gli1P47806 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms