Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gm8365-201ENSMUST00000197334 648 ntBASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.2□□□□□ -0.62
Nkx2-6P43688 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.2□□□□□ -0.62
Nkx2-6P43688 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.2□□□□□ -0.62
Nkx2-6P43688 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nkx2-6P43688 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm8731-201ENSMUST00000118088 412 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm15573-201ENSMUST00000119487 540 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm15566-201ENSMUST00000121130 590 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm4726-201ENSMUST00000135604 736 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm6019-201ENSMUST00000148369 736 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm9358-201ENSMUST00000183067 927 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Mir7076-201ENSMUST00000183519 74 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm6108-201ENSMUST00000208365 367 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm7600-201ENSMUST00000209657 785 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.19□□□□□ -0.62
Nkx2-6P43688 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-6P43688 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.18□□□□□ -0.62
Nkx2-6P43688 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Map1b-203ENSMUST00000223725 2669 ntBASIC11.18□□□□□ -0.62
Nkx2-6P43688 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-6P43688 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.18□□□□□ -0.62
Nkx2-6P43688 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms