Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Hist1h1aP43275 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hist1h1aP43275 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Gm14660-201ENSMUST00000119809 575 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.75□□□□□ -0.85
Hist1h1aP43275 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Hist1h1aP43275 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.74□□□□□ -0.85
Hist1h1aP43275 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Gm10434-201ENSMUST00000101158 471 ntBASIC9.74□□□□□ -0.85
Hist1h1aP43275 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Mir1247-201ENSMUST00000116706 82 ntBASIC9.74□□□□□ -0.85
Hist1h1aP43275 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Gm13226-201ENSMUST00000117838 404 ntBASIC9.74□□□□□ -0.85
Hist1h1aP43275 Gm15824-201ENSMUST00000119516 955 ntBASIC9.74□□□□□ -0.85
Hist1h1aP43275 Gm13875-201ENSMUST00000120162 282 ntBASIC9.74□□□□□ -0.85
Hist1h1aP43275 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.74□□□□□ -0.85
Hist1h1aP43275 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.74□□□□□ -0.85
Hist1h1aP43275 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.74□□□□□ -0.85
Hist1h1aP43275 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.74□□□□□ -0.85
Hist1h1aP43275 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.74□□□□□ -0.85
Hist1h1aP43275 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Hist1h1aP43275 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms