Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdx2P43241 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Gm7741-201ENSMUST00000181445 989 ntBASIC11.22□□□□□ -0.61
Cdx2P43241 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdx2P43241 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.22□□□□□ -0.61
Cdx2P43241 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdx2P43241 Gm42816-201ENSMUST00000198433 325 ntBASIC11.22□□□□□ -0.61
Cdx2P43241 Gm3726-201ENSMUST00000203110 785 ntBASIC11.22□□□□□ -0.61
Cdx2P43241 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.22□□□□□ -0.61
Cdx2P43241 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.22□□□□□ -0.61
Cdx2P43241 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.22□□□□□ -0.61
Cdx2P43241 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.22□□□□□ -0.61
Cdx2P43241 Gm4604-201ENSMUST00000025040 390 ntBASIC11.22□□□□□ -0.61
Cdx2P43241 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdx2P43241 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cdx2P43241 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.22□□□□□ -0.61
Cdx2P43241 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdx2P43241 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.22□□□□□ -0.61
Cdx2P43241 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cdx2P43241 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdx2P43241 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.21□□□□□ -0.61
Cdx2P43241 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdx2P43241 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdx2P43241 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdx2P43241 Gm13549-201ENSMUST00000118339 796 ntBASIC11.21□□□□□ -0.61
Cdx2P43241 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.21□□□□□ -0.61
Cdx2P43241 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdx2P43241 Gm18463-201ENSMUST00000207258 474 ntBASIC11.21□□□□□ -0.61
Cdx2P43241 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.21□□□□□ -0.61
Cdx2P43241 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.21□□□□□ -0.61
Cdx2P43241 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.21□□□□□ -0.61
Cdx2P43241 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdx2P43241 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx2P43241 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx2P43241 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Cdx2P43241 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx2P43241 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx2P43241 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx2P43241 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.21□□□□□ -0.62
Cdx2P43241 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.21□□□□□ -0.62
Cdx2P43241 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx2P43241 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdx2P43241 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdx2P43241 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.2□□□□□ -0.62
Cdx2P43241 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdx2P43241 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.2□□□□□ -0.62
Cdx2P43241 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdx2P43241 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cdx2P43241 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx2P43241 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdx2P43241 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdx2P43241 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdx2P43241 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdx2P43241 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms