Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sox6P40645 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.12□□□□□ -0.63
Sox6P40645 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sox6P40645 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Sox6P40645 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Gm15198-201ENSMUST00000117283 177 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Gm11531-201ENSMUST00000117614 555 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.11□□□□□ -0.63
Sox6P40645 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.11□□□□□ -0.63
Sox6P40645 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.11□□□□□ -0.63
Sox6P40645 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 Gm18304-201ENSMUST00000189162 546 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Gm43822-201ENSMUST00000200285 476 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Gm44958-201ENSMUST00000203734 736 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.11□□□□□ -0.63
Sox6P40645 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sox6P40645 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Gm30285-201ENSMUST00000214614 422 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Gm39404-201ENSMUST00000216350 313 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sox6P40645 Olfr582-201ENSMUST00000098212 960 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.11□□□□□ -0.63
Sox6P40645 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sox6P40645 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox6P40645 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox6P40645 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.1□□□□□ -0.63
Sox6P40645 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.1□□□□□ -0.63
Sox6P40645 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox6P40645 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Sox6P40645 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox6P40645 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Sox6P40645 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Gm21769-201ENSMUST00000211922 111 ntBASIC11.1□□□□□ -0.63
Sox6P40645 Gm5950-201ENSMUST00000213337 772 ntBASIC11.1□□□□□ -0.63
Sox6P40645 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Cts7-204ENSMUST00000225321 1257 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms