Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Chd1P40201 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chd1P40201 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chd1P40201 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC17.33■□□□□ 0.36
Chd1P40201 Gm20091-201ENSMUST00000179683 189 ntBASIC17.33■□□□□ 0.36
Chd1P40201 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC17.33■□□□□ 0.36
Chd1P40201 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC17.33■□□□□ 0.36
Chd1P40201 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Chd1P40201 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC17.33■□□□□ 0.36
Chd1P40201 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC17.32■□□□□ 0.36
Chd1P40201 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chd1P40201 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 AC151836.1-201ENSMUST00000228730 1637 ntBASIC17.32■□□□□ 0.36
Chd1P40201 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd1P40201 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chd1P40201 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC17.32■□□□□ 0.36
Chd1P40201 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd1P40201 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC17.32■□□□□ 0.36
Chd1P40201 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd1P40201 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chd1P40201 Gm45745-201ENSMUST00000211447 1180 ntBASIC17.32■□□□□ 0.36
Chd1P40201 AC132384.2-201ENSMUST00000218018 526 ntBASIC17.32■□□□□ 0.36
Chd1P40201 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC17.32■□□□□ 0.36
Chd1P40201 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Gm43152-201ENSMUST00000202495 1638 ntBASIC17.32■□□□□ 0.36
Chd1P40201 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chd1P40201 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd1P40201 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Gm9353-201ENSMUST00000200472 604 ntBASIC17.31■□□□□ 0.36
Chd1P40201 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC17.31■□□□□ 0.36
Chd1P40201 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC17.31■□□□□ 0.36
Chd1P40201 AC159196.1-201ENSMUST00000225524 377 ntBASIC17.31■□□□□ 0.36
Chd1P40201 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC17.31■□□□□ 0.36
Chd1P40201 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chd1P40201 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Gm37582-201ENSMUST00000192953 1409 ntBASIC17.31■□□□□ 0.36
Chd1P40201 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chd1P40201 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chd1P40201 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Chd1P40201 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Chd1P40201 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Chd1P40201 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC17.3■□□□□ 0.36
Chd1P40201 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC17.3■□□□□ 0.36
Chd1P40201 Mir1893-201ENSMUST00000122565 83 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC17.3■□□□□ 0.36
Chd1P40201 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC17.3■□□□□ 0.36
Chd1P40201 Gm5292-201ENSMUST00000073317 580 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Gm8730-201ENSMUST00000076373 954 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Chd1P40201 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC17.3■□□□□ 0.36
Chd1P40201 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Gm6157-201ENSMUST00000199935 1897 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms