Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fen1P39749 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fen1P39749 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Fen1P39749 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Fen1P39749 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fen1P39749 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Fen1P39749 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.9□□□□□ -0.5
Fen1P39749 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Fen1P39749 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.9□□□□□ -0.5
Fen1P39749 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Fen1P39749 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Fen1P39749 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Fen1P39749 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.9□□□□□ -0.51
Fen1P39749 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.9□□□□□ -0.51
Fen1P39749 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Fen1P39749 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.89□□□□□ -0.51
Fen1P39749 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.89□□□□□ -0.51
Fen1P39749 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Fen1P39749 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Fen1P39749 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Fen1P39749 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.89□□□□□ -0.51
Fen1P39749 Gm12036-201ENSMUST00000120008 530 ntBASIC11.89□□□□□ -0.51
Fen1P39749 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Fen1P39749 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.89□□□□□ -0.51
Fen1P39749 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Fen1P39749 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.89□□□□□ -0.51
Fen1P39749 Gm27682-201ENSMUST00000183930 110 ntBASIC11.89□□□□□ -0.51
Fen1P39749 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Fen1P39749 Gm9136-201ENSMUST00000193368 454 ntBASIC11.89□□□□□ -0.51
Fen1P39749 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.89□□□□□ -0.51
Fen1P39749 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.89□□□□□ -0.51
Fen1P39749 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.89□□□□□ -0.51
Fen1P39749 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.89□□□□□ -0.51
Fen1P39749 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.89□□□□□ -0.51
Fen1P39749 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.89□□□□□ -0.51
Fen1P39749 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.89□□□□□ -0.51
Fen1P39749 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Fen1P39749 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Fen1P39749 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Fen1P39749 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Fen1P39749 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fen1P39749 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.89□□□□□ -0.51
Fen1P39749 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Fen1P39749 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Fen1P39749 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.88□□□□□ -0.51
Fen1P39749 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Gm23912-201ENSMUST00000104687 87 ntBASIC11.88□□□□□ -0.51
Fen1P39749 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.88□□□□□ -0.51
Fen1P39749 Gm13342-201ENSMUST00000121055 207 ntBASIC11.88□□□□□ -0.51
Fen1P39749 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Fen1P39749 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Fen1P39749 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.88□□□□□ -0.51
Fen1P39749 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.88□□□□□ -0.51
Fen1P39749 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.88□□□□□ -0.51
Fen1P39749 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.88□□□□□ -0.51
Fen1P39749 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.88□□□□□ -0.51
Fen1P39749 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Fen1P39749 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Fen1P39749 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fen1P39749 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fen1P39749 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Fen1P39749 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fen1P39749 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fen1P39749 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.87□□□□□ -0.51
Fen1P39749 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms