Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.33□□□□□ -0.92
Rom1P32958 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Rom1P32958 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Rom1P32958 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Rom1P32958 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Rom1P32958 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Rom1P32958 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Rom1P32958 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.32□□□□□ -0.92
Rom1P32958 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.32□□□□□ -0.92
Rom1P32958 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.32□□□□□ -0.92
Rom1P32958 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Rom1P32958 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Rom1P32958 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.32□□□□□ -0.92
Rom1P32958 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.32□□□□□ -0.92
Rom1P32958 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Gm10254-201ENSMUST00000052888 867 ntBASIC9.32□□□□□ -0.92
Rom1P32958 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.32□□□□□ -0.92
Rom1P32958 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.32□□□□□ -0.92
Rom1P32958 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Rom1P32958 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Rom1P32958 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.31□□□□□ -0.92
Rom1P32958 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rom1P32958 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rom1P32958 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms