Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm16177-201ENSMUST00000120728 718 ntBASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm9022-201ENSMUST00000182482 992 ntBASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.18□□□□□ -0.78
Slc6a1P31648 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Slc6a1P31648 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Slc6a1P31648 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.17□□□□□ -0.78
Slc6a1P31648 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm9136-201ENSMUST00000193368 454 ntBASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.17□□□□□ -0.78
Slc6a1P31648 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm807-202ENSMUST00000224929 408 ntBASIC10.17□□□□□ -0.78
Slc6a1P31648 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.17□□□□□ -0.78
Slc6a1P31648 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Slc6a1P31648 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Slc6a1P31648 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Slc6a1P31648 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Slc6a1P31648 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms