Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
Nedd8P29595 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nedd8P29595 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nedd8P29595 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.85□□□□□ -0.67
Nedd8P29595 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.85□□□□□ -0.67
Nedd8P29595 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.85□□□□□ -0.67
Nedd8P29595 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.85□□□□□ -0.67
Nedd8P29595 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nedd8P29595 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.85□□□□□ -0.67
Nedd8P29595 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.85□□□□□ -0.67
Nedd8P29595 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
Nedd8P29595 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.85□□□□□ -0.67
Nedd8P29595 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.85□□□□□ -0.67
Nedd8P29595 Gm42693-201ENSMUST00000196779 631 ntBASIC10.85□□□□□ -0.67
Nedd8P29595 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nedd8P29595 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.85□□□□□ -0.67
Nedd8P29595 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nedd8P29595 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.85□□□□□ -0.67
Nedd8P29595 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.85□□□□□ -0.67
Nedd8P29595 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nedd8P29595 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nedd8P29595 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nedd8P29595 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nedd8P29595 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.84□□□□□ -0.67
Nedd8P29595 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nedd8P29595 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nedd8P29595 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Gm11637-201ENSMUST00000120601 592 ntBASIC10.84□□□□□ -0.67
Nedd8P29595 Gm15487-201ENSMUST00000122373 465 ntBASIC10.84□□□□□ -0.67
Nedd8P29595 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Nedd8P29595 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.84□□□□□ -0.67
Nedd8P29595 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Nedd8P29595 Gm32025-201ENSMUST00000217960 307 ntBASIC10.84□□□□□ -0.67
Nedd8P29595 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.84□□□□□ -0.67
Nedd8P29595 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.84□□□□□ -0.67
Nedd8P29595 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms