Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.8□□□□□ -0.52
Nckap1P28660 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Gm14585-201ENSMUST00000120713 634 ntBASIC11.8□□□□□ -0.52
Nckap1P28660 Gm11246-201ENSMUST00000120880 345 ntBASIC11.8□□□□□ -0.52
Nckap1P28660 Gm12208-201ENSMUST00000122004 163 ntBASIC11.8□□□□□ -0.52
Nckap1P28660 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nckap1P28660 Gm26047-201ENSMUST00000157308 113 ntBASIC11.8□□□□□ -0.52
Nckap1P28660 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.8□□□□□ -0.52
Nckap1P28660 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.8□□□□□ -0.52
Nckap1P28660 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.8□□□□□ -0.52
Nckap1P28660 Gm38117-201ENSMUST00000194653 939 ntBASIC11.8□□□□□ -0.52
Nckap1P28660 Gm26047-202ENSMUST00000198840 115 ntBASIC11.8□□□□□ -0.52
Nckap1P28660 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Nckap1P28660 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Nckap1P28660 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.8□□□□□ -0.52
Nckap1P28660 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.8□□□□□ -0.52
Nckap1P28660 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Nckap1P28660 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Gm15352-201ENSMUST00000118696 270 ntBASIC11.79□□□□□ -0.52
Nckap1P28660 Gm15595-201ENSMUST00000120840 961 ntBASIC11.79□□□□□ -0.52
Nckap1P28660 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.79□□□□□ -0.52
Nckap1P28660 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.79□□□□□ -0.52
Nckap1P28660 Gm23045-201ENSMUST00000175041 96 ntBASIC11.79□□□□□ -0.52
Nckap1P28660 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.79□□□□□ -0.52
Nckap1P28660 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nckap1P28660 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nckap1P28660 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.79□□□□□ -0.52
Nckap1P28660 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.79□□□□□ -0.52
Nckap1P28660 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.79□□□□□ -0.52
Nckap1P28660 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nckap1P28660 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.78□□□□□ -0.52
Nckap1P28660 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nckap1P28660 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nckap1P28660 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms