Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.18□□□□□ -0.46
Nfkb1P25799 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nfkb1P25799 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.18□□□□□ -0.46
Nfkb1P25799 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nfkb1P25799 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nfkb1P25799 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm13916-201ENSMUST00000117368 628 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm11956-201ENSMUST00000119525 512 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm4726-201ENSMUST00000135604 736 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm6019-201ENSMUST00000148369 736 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm15881-201ENSMUST00000148792 942 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm9132-201ENSMUST00000210182 832 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.17□□□□□ -0.46
Nfkb1P25799 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Nfkb1P25799 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.17□□□□□ -0.46
Nfkb1P25799 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nfkb1P25799 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
Nfkb1P25799 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.17□□□□□ -0.46
Nfkb1P25799 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.17□□□□□ -0.46
Nfkb1P25799 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nfkb1P25799 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nfkb1P25799 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm8731-201ENSMUST00000118088 412 ntBASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm11667-201ENSMUST00000119828 486 ntBASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm12029-201ENSMUST00000120073 832 ntBASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm8285-201ENSMUST00000208293 759 ntBASIC12.16□□□□□ -0.46
Nfkb1P25799 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm6867-201ENSMUST00000219165 425 ntBASIC12.16□□□□□ -0.46
Nfkb1P25799 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.16□□□□□ -0.46
Nfkb1P25799 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.16□□□□□ -0.46
Nfkb1P25799 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nfkb1P25799 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nfkb1P25799 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms