Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TP20293 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
TP20293 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.18□□□□□ -0.62
TP20293 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.18□□□□□ -0.62
TP20293 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.18□□□□□ -0.62
TP20293 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TP20293 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.17□□□□□ -0.62
TP20293 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.17□□□□□ -0.62
TP20293 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.17□□□□□ -0.62
TP20293 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.17□□□□□ -0.62
TP20293 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
TP20293 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.17□□□□□ -0.62
TP20293 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.17□□□□□ -0.62
TP20293 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.17□□□□□ -0.62
TP20293 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.17□□□□□ -0.62
TP20293 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.17□□□□□ -0.62
TP20293 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.17□□□□□ -0.62
TP20293 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.17□□□□□ -0.62
TP20293 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
TP20293 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
TP20293 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
TP20293 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.17□□□□□ -0.62
TP20293 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
TP20293 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TP20293 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TP20293 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
TP20293 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
TP20293 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TP20293 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TP20293 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TP20293 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
TP20293 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.16□□□□□ -0.62
TP20293 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.16□□□□□ -0.62
TP20293 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.16□□□□□ -0.62
TP20293 Gm13296-201ENSMUST00000117854 997 ntBASIC11.16□□□□□ -0.62
TP20293 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.16□□□□□ -0.62
TP20293 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.16□□□□□ -0.62
TP20293 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.16□□□□□ -0.62
TP20293 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.16□□□□□ -0.62
TP20293 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.16□□□□□ -0.62
TP20293 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.16□□□□□ -0.62
TP20293 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.16□□□□□ -0.62
TP20293 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.16□□□□□ -0.62
TP20293 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TP20293 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TP20293 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms