Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm43962-201ENSMUST00000203898 190 ntBASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.9□□□□□ -0.34
Chmp6P0C0A3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp6P0C0A3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chmp6P0C0A3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chmp6P0C0A3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Gm14208-201ENSMUST00000119645 678 ntBASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.89□□□□□ -0.35
Chmp6P0C0A3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chmp6P0C0A3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm24990-201ENSMUST00000157406 323 ntBASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm27341-201ENSMUST00000183570 106 ntBASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.88□□□□□ -0.35
Chmp6P0C0A3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms