Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Hoxc9P09633 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC15.22■□□□□ 0.03
Hoxc9P09633 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.22■□□□□ 0.03
Hoxc9P09633 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Hoxc9P09633 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hoxc9P09633 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC15.22■□□□□ 0.03
Hoxc9P09633 Gm17709-201ENSMUST00000174536 1096 ntBASIC15.22■□□□□ 0.03
Hoxc9P09633 Gm21778-201ENSMUST00000178779 471 ntBASIC15.22■□□□□ 0.03
Hoxc9P09633 Gm23694-201ENSMUST00000179335 110 ntBASIC15.22■□□□□ 0.03
Hoxc9P09633 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC15.22■□□□□ 0.03
Hoxc9P09633 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Hoxc9P09633 Gm37638-201ENSMUST00000194337 1123 ntBASIC15.22■□□□□ 0.03
Hoxc9P09633 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 AC164618.2-201ENSMUST00000224770 573 ntBASIC15.22■□□□□ 0.03
Hoxc9P09633 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Hoxc9P09633 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Hoxc9P09633 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hoxc9P09633 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Gm15528-201ENSMUST00000117821 864 ntBASIC15.21■□□□□ 0.03
Hoxc9P09633 Gm13549-201ENSMUST00000118339 796 ntBASIC15.21■□□□□ 0.03
Hoxc9P09633 Gm16219-201ENSMUST00000120096 274 ntBASIC15.21■□□□□ 0.03
Hoxc9P09633 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC15.21■□□□□ 0.03
Hoxc9P09633 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Gm18776-201ENSMUST00000188833 654 ntBASIC15.21■□□□□ 0.03
Hoxc9P09633 Gm19587-201ENSMUST00000191395 545 ntBASIC15.21■□□□□ 0.03
Hoxc9P09633 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Hoxc9P09633 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc9P09633 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC15.21■□□□□ 0.02
Hoxc9P09633 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Hoxc9P09633 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Hoxc9P09633 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Hoxc9P09633 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hoxc9P09633 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hoxc9P09633 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm9415-201ENSMUST00000200462 1321 ntBASIC15.2■□□□□ 0.02
Hoxc9P09633 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Gm44190-201ENSMUST00000205083 1401 ntBASIC15.2■□□□□ 0.02
Hoxc9P09633 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc9P09633 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc9P09633 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms