Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Gm13117-201ENSMUST00000120894 691 ntBASIC12.22□□□□□ -0.45
PrnpP04925 Gm10169-201ENSMUST00000121822 348 ntBASIC12.22□□□□□ -0.45
PrnpP04925 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.22□□□□□ -0.45
PrnpP04925 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.22□□□□□ -0.45
PrnpP04925 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.22□□□□□ -0.45
PrnpP04925 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.22□□□□□ -0.45
PrnpP04925 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.22□□□□□ -0.45
PrnpP04925 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PrnpP04925 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.22□□□□□ -0.45
PrnpP04925 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.22□□□□□ -0.45
PrnpP04925 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
PrnpP04925 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PrnpP04925 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.21□□□□□ -0.45
PrnpP04925 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PrnpP04925 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
PrnpP04925 Gm14807-201ENSMUST00000116640 983 ntBASIC12.21□□□□□ -0.45
PrnpP04925 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PrnpP04925 Gm12030-201ENSMUST00000121917 223 ntBASIC12.21□□□□□ -0.45
PrnpP04925 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.21□□□□□ -0.45
PrnpP04925 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.21□□□□□ -0.45
PrnpP04925 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.21□□□□□ -0.45
PrnpP04925 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.21□□□□□ -0.45
PrnpP04925 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.21□□□□□ -0.45
PrnpP04925 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.21□□□□□ -0.45
PrnpP04925 Gm9135-201ENSMUST00000182963 990 ntBASIC12.21□□□□□ -0.45
PrnpP04925 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.21□□□□□ -0.45
PrnpP04925 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
PrnpP04925 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.21□□□□□ -0.45
PrnpP04925 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.21□□□□□ -0.45
PrnpP04925 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.21□□□□□ -0.45
PrnpP04925 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Gm5805-201ENSMUST00000072779 456 ntBASIC12.21□□□□□ -0.45
PrnpP04925 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PrnpP04925 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PrnpP04925 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PrnpP04925 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
PrnpP04925 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
PrnpP04925 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrnpP04925 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PrnpP04925 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PrnpP04925 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PrnpP04925 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrnpP04925 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PrnpP04925 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrnpP04925 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrnpP04925 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.2□□□□□ -0.46
PrnpP04925 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrnpP04925 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PrnpP04925 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrnpP04925 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrnpP04925 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PrnpP04925 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PrnpP04925 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
PrnpP04925 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
PrnpP04925 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms