Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Cog3-203ENSMUST00000227473 4197 ntBASIC10.84□□□□□ -0.67
P01852 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.84□□□□□ -0.67
P01852 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
P01852 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
P01852 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.84□□□□□ -0.67
P01852 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P01852 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
P01852 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
P01852 Gm8343-201ENSMUST00000182705 994 ntBASIC10.84□□□□□ -0.67
P01852 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Gm37466-201ENSMUST00000195692 652 ntBASIC10.84□□□□□ -0.67
P01852 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.84□□□□□ -0.67
P01852 Gm18893-201ENSMUST00000198416 943 ntBASIC10.84□□□□□ -0.67
P01852 Rps4l-202ENSMUST00000204242 789 ntBASIC10.84□□□□□ -0.67
P01852 Gm17931-201ENSMUST00000208132 634 ntBASIC10.84□□□□□ -0.67
P01852 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P01852 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.84□□□□□ -0.67
P01852 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.84□□□□□ -0.67
P01852 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.84□□□□□ -0.67
P01852 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.84□□□□□ -0.67
P01852 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P01852 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P01852 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
P01852 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.84□□□□□ -0.67
P01852 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P01852 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P01852 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01852 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
P01852 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.83□□□□□ -0.68
P01852 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.83□□□□□ -0.68
P01852 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
P01852 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P01852 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
P01852 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P01852 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
P01852 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Gm4909-201ENSMUST00000118749 794 ntBASIC10.83□□□□□ -0.68
P01852 Gm12036-201ENSMUST00000120008 530 ntBASIC10.83□□□□□ -0.68
P01852 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.83□□□□□ -0.68
P01852 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.83□□□□□ -0.68
P01852 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
P01852 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.83□□□□□ -0.68
P01852 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.83□□□□□ -0.68
P01852 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Gm26448-201ENSMUST00000082446 203 ntBASIC10.83□□□□□ -0.68
P01852 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P01852 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
P01852 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
P01852 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.83□□□□□ -0.68
P01852 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.83□□□□□ -0.68
P01852 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.83□□□□□ -0.68
P01852 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.83□□□□□ -0.68
P01852 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.83□□□□□ -0.68
P01852 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01852 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01852 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01852 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01852 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01852 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
P01852 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.82□□□□□ -0.68
P01852 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01852 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.82□□□□□ -0.68
P01852 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01852 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01852 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms